BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018D07LP1|AL427308
(968 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1548 1166 0.0
>3x_Contig1548
Length = 9830
Score = 1166 bits (588), Expect = 0.0
Identities = 588/588 (100%)
Strand = Plus / Minus
Query: 1 attcacgtaactgggcagttcaaactcttgtagccgagagtttaaaaagtccttcacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 attcacgtaactgggcagttcaaactcttgtagccgagagtttaaaaagtccttcacacc 532
Query: 61 ttgattaacgcttaaatccccacggatattatcccaatcaatttctactgacatgatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ttgattaacgcttaaatccccacggatattatcccaatcaatttctactgacatgatcca 472
Query: 121 ctatgaacaatctctctggcatatgattcgacaccattagatccttactctcttcgttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ctatgaacaatctctctggcatatgattcgacaccattagatccttactctcttcgttgc 412
Query: 181 atcgaacaaaactcaatcttgttcgatatgacaagtacctgttatgaatatttttattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 atcgaacaaaactcaatcttgttcgatatgacaagtacctgttatgaatatttttattac 352
Query: 241 gccattttcatattgaaaagagtttcagtttacataaccagaataatgccaaaagttgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gccattttcatattgaaaagagtttcagtttacataaccagaataatgccaaaagttgga 292
Query: 301 cagatgagtttataaacaaaggcatatattttgatagagccctcattcgaagatgttgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cagatgagtttataaacaaaggcatatattttgatagagccctcattcgaagatgttgac 232
Query: 361 agtaggtactggcaaaattgctatgattctgtctttttctaagcttacaccctgcccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 agtaggtactggcaaaattgctatgattctgtctttttctaagcttacaccctgcccaca 172
Query: 421 agcttctgccctcggaaaaaggtcattttttaacttgacaaccgaagcatcgtccaaaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 agcttctgccctcggaaaaaggtcattttttaacttgacaaccgaagcatcgtccaaaga 112
Query: 481 tgaacaacactatgtgttaaaaaggaacattcgcggcactccaaatgaggtttatgaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 tgaacaacactatgtgttaaaaaggaacattcgcggcactccaaatgaggtttatgaagt 52
Query: 541 tgtctctgaagtatccaactacaaagactttattccatactgcactga 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 tgtctctgaagtatccaactacaaagactttattccatactgcactga 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7047
Number of Sequences: 1807
Number of extensions: 7047
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 968
length of database: 10,358,551
effective HSP length: 16
effective length of query: 952
effective length of database: 10,329,639
effective search space: 9833816328
effective search space used: 9833816328
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)